序号

论文信息

1.

Shi YH, Zhu SW, Mao XZ, Feng JX, Qin YM, Zhang L, Cheng J, Wei LP, Wang ZY, Zhu YX (2006) Transcriptome profiling, molecular biological, and physiological studies reveal a major role for ethylene in cotton fiber cell elongation. The Plant Cell, 18: 651-664.

2.

Qu LJ, Zhu YX (2006) Transcription factor families in Arabidopsis: major progress and outstanding issues for future research – Commentary. Current Opinion in Plant Biology, 9: 544–549.

3.

Shi YM, Zhao WX, Zhang W, Ye Z, Zhao JD (2006) Regulation of intracellular free calcium concentration during heterocyst differentiation by HetR and NtcA in Anabaena sp PCC 7120. Proceedings of The National Academy of Sciences of The United States of America, 103: 11334-11339.

4.

Chen X, Wu JM, Hornischer K, Kel A, Wingende E (2006) TiProD: the Tissue-specific Promoter Database. Nucleic Acids Research, 34: D104-D107.

5.

Zhang Y, Liu XS, Liu QR, Wei LP (2006) Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species. Nucleic Acids Research, 34: 3465-3475.

6.

Wu JM XZ, Cai MT, Luo JC, Wei LP (2006) KOBAS server:a web-based platform for automated annotation and pathway identification. Nucleic Acids Research, 34: W720–W724.

7.

Ji XW, Li W, Song J, Wei LP, Liu XS (2006) CEAS:cis-regulatory element annotation system. Nucleic Acids Research, 34: W551–W554.

8.

Fu J, Yang ZQ, Wei JX, Han JH, Gu J (2006) Nuclear protein NP60 regulates p38 MAPK activity. Journal of Cell Science, 119:115-123.

9.

Huo YX, Tian ZX, Rappas M, Wen J, Chen YC, You CH, Zhang XD, Buck M, Wang YP, Kolb A (2006) Protein-Induced DNA Bending clarifies the architectural organization of the 54-dependent glnAp2 promoter. Mol. Microbiol, 59: 168-180.

10.

Wang BC, Wang HX, Feng JX, Meng DZ, Qu LJ, Zhu YX (2006) Post-translational modifications, but not transcriptional regulation, of major chloroplast RNA-binding proteins are related to Arabidopsis seedling development. Proteomics, 6: 2555-2563.

11.

Yang W, Liu P, Liu YS, Wang QS, Tong YP, Ji JG (2006) Proteomic analysis of rat pheochromocytoma PC12 cells. Proteomics, 6: 2982-2990.

12.

He SZ, Wang QS, He JT, Pu H, Yang W, Ji JG (2006) Proteomic analysis and comparison of the biopsy and autopsy specimen of human brain temporal lobe. Proteomics, 6: 4987-4996.

13.

Diao WF, Chen WQ, Wu YY, Liu P, Xie XL, Li S, Shen PP, Ji JG (2006) Serum, liver, and kidney proteomic analysis for the alloxan-induced type I diabetic mice after insulin gene transfer of naked plasmid through electroporation. Proteomics, 6: 5837-5845.

14.

Gao G, Zhong YF; Guo AY, Zhu QH, Tang W, Zheng WM, Gu XC, Wei LP, Luo JC (2006) DRTF: a database of rice transcription factors. Bionformatics, 21: 1286-1287.

15.

Yu YM, Liang YH, Brostromer E, Quan JM, Panjikar S, Dong YH, Su XD (2006) A catalytic mechanism revealed by the crystal structures of the imidazolonepropionase from Bacillus subtilis. Journal of Biological Chemistry, 281: 36929-36936.

16.

Cai ZT, Mao XZ, Li SG, Wei LP (2006) Genome comparison using Gene Ontology (GO) with statistical testing. BMC Bioinformatics, 7: 374.

17.

Wang XY, Shi XL, Li Z, Zhu,QH, Kong L, Tang W, Ge S, Luo JC (2006) Statistical inference of chromosomal homology based on gene colinearity and applications to Arabidopsis and rice. BMC Bioinformatics, 7: 447.

18.

Wei J, Sun Z, Chen Q, Gu J (2006) Serum deprivation induced apoptosis in macrophage is mediated by autocrine secretion of type IIFNs. Apoptosis, 11: 545-554.

19.

Peng YB, Zou C, Wang DH, Gong HQ, Xu ZH, Bai SN (2006) Preferential localization of abscisic acid in primordial and nursing cells of reproductive organs of Arabidopsis and cucumber. New phytologist, 170: 459–466.

20.

Sun YC, Li Y, Zhang H, Yan HQ, Dowling DN, Wang YP (2006) Reconstitution of the enzyme AroA and its glyphosate tolerance by fragment complementation. FEBS Letters, 580:1521–1527.

21.

Feng YJ, Jiao WW, Fu XM, Chang ZY (2006) Stepwise disassembly and apparent nonstepwise reassembly for the oligomeric RbsD protein. Protein Science , 15:1441-1448.

22.

Chen YH, Yang XY, He K, Liu MH, Li JG, Gao ZF, Lin ZQ, Zhang YF, Wang XX, Qiu XM, Shen YP, Zhang L, Deng XH, Luo JC, Deng XW, Chen ZL, Gu HY, Qu LJ (2006) The MYB transcription factor superfamily of arabidopsis: Expression analysis and phylogenetic comparison with the rice MYB family. Plant Molecular Biology, 60:107-124.

23.

Lu XC, Gong HQ, Huang ML, Bai SL, He YB, Mao XZ, Geng Z, Li SG, Wei LP, Yuwen JS, Xu ZH, Bai SN (2006) Molecular analysis of early rice stamen development using organ-specific gene expression profiling. Plant Molecular Biology, 61: 845-861.

24.

Zhai RT, Meng G, Zhao YM, Liu B, Zhang GF, Zheng XF (2006) A novel nuclear-localized protein with special adenylate kinase properties from Caenorhabditis elegans. FEBS LETTERS, 580: 3811-3817.

25.

Li JG, Li XJ, Guo L, Lu F, Feng XJ, He K, Wei LP, Chen ZL, Qu LJ, Gu HY (2006) A subgroup of MYB transcription factor genes undergoes highly conserved alternative splicing in Arabidopsis and rice. Journal of Experimental Botany, 57: 1263-1273.

26.

Jiang YQ, Wang HR, Li HP, Hao HJ, Zheng YL, Gu J (2006) Targeting of hepatoma cell and suppression of tumor growth by a novel 12mer peptide fused to superantigen TSST-1. Molecular Medicine, 12: 81-87.

27.

Xu DY, Liu XW, Guo C, Zhao JD (2006) Methylglyoxal detoxification by an aldo-keto reductase in the cyanobacterium Synechococcus sp PCC 7002. Microbiology-SGM, 152: 2013-2021.

28.

Zhang XY, Wu Y, Yan JY, Gao Y, Wang Y, Mi SL, An CC (2006) Y55 and D78 are crucial amino acid residues of a new IgE epitope on trichosanthin. Biochemical and Biophysical Reseach Communications, 343: 1251-1256.

29.

Nan BY, Zhou YF, Liang YH, Wen J, Ma Q, Zhang SW, Wang YP, Su XD (2006) Purification and preliminary X-ray crystallographic analysis of the ligand-binding domain of Sinorhizobium meliloti DctB. Biochimica Et Bbiophysica Acta-Proteins and Proteomics, 1764: 839-841.

30.

Li JG, Yang XY, Wang Y, Li XJ, Gao ZF, Pei M, Chen ZL, Qu LJ, Gu HY (2006) Two groups of MYB transcription factors share a motif which enhances trans-activation activity. Biochemical and Biophysical Research Communications, 341: 1155-1163.

31.

Fu XM, Chang ZY (2006) Identification of bis-ANS binding sites in Mycobacterium tuberculosis small heat shock protein Hsp16.3: Evidences for a two-step substrate-binding mechanism. Biochemical and Biophysical Research Communications, 349: 167–171.

32.

Fu XM, Jiao WW, Chang ZY (2006) Phylogenetic and biochemical studies reveal a potential evolutionary origin of small heat shock proteins of animals from bacterial class A. Journal of Molecular Evolution, 62:257-266.

33.

Shi XL, Wang XY, Li Z, Zhu QH, Tang W, Ge S, Luo JC (2006) Nucleotide substitution pattern in rice paralogues: Implication for negative correlation between the synonymous substitution rate and codon usage bias. Gene, 376: 199-206.

34.

He JY, Deng J, Zheng J and Gu J (2006) A synergistic effect on the production of S-adenosyl-l-methionine in Pichia pastoris by knocking in of S-adenosyl-l-methionine synthase and knocking out of cystathionine-beta synthase. J Biotechnol, 126: 519-527.

35.

Liu XY, Shi M, Liao YH, Gao Y, Zhang ZK, Wen DH, Wu WZ, An CC (2006) Feeding characteristics of an amoeba (Lobosea : Naegleria) grazing upon cyanobacteria: Food selection, ingestion and digestion progress. Microbial Ecology, 51: 315-325.

36.

Shi M, Zou L, Liu XY, Gao Y, Zhang ZK, Wu WZ, Wen DH, Chen ZL, An CC (2006) A novel bacterium Saprospira sp strain PdY3 forms bundles and lyses cyanobacteria. Frontiers in Bioscience, 11:1916-1923.

37.

Guo L, Wang ZY, Lin H, Cui WE, Chen J, Liu MH, Chen ZL, Qu LJ, Gu HY (2006) Expression and functional analysis of the rice plasma-membrane intrinsic protein gene family. Cell Research, 16: 277-286.

38.

Fu WX, Wei JX, Gu J (2006) MEF2C mediates the activation induced cell death (AICD) of macrophages. Cell Research, 16: 559-565.

39.

Yu YM, Li LF, Zheng XF, Liang YH, Su XD (2006) Protein preparation, crystallization and preliminary X-ray analysis of imidazolonepropionase from Bacillus subtilis. Biochimica Et Bbiophysica Acta-Proteins and Proteomics, 1764:153-156.

40.

Zhou YF, Mi W, Li LF, Zhang XY, Liang YH, Su XD, Wei SC (2006) Protein preparation, crystallization and preliminary X-ray crystallographic analysis of Smu.1475c from caries pathogen Streptoeoeeus mutans. Biochimica Et Bbiophysica Acta-Proteins and Proteomics, 1764: 324-326.

41.

Huang M, Wang YH, Sun DC, Zhu HX, Yin YB, Zhang W, Yang SB, Quan LP, Bai JF, Wang SQ, Chen Q, Li SG, Xu NZ (2006) Identification of genes regulated by Wnt/β-catenin pathway and involved in apoptosis via microarray analysis. BMC Caner, 6: 221

42.

Huo YX, Nan BY, You CH, Tian ZX, Kolb A, Wang YP (2006) FIS activates glnAp2 in Escherichia coli: role of a DNA bend centered at-55, upstream of the transcription start site. FEMS MICROBIOLOGY LETTERS, 257: 99-105.

43.

Cai H, Yu DH, Hu XD, Li SX, Zhu YX (2006) A combined DNA vaccine-prime, BCG-boost strategy results in better protection against Mycobacterium bovis challenge. DNA and Cell Biology, 25: 438-447.

44.

Chen Q, Hui RT, Sun CH, Gu XC, Luo M, Zheng XF (2006) Soluble expression, purification, and stabilization of a pro-apoptotic human protein. Carp Protein Expression and Purification, 45: 329-334.

45.

Fu XM, Chang ZY (2006) Identification of a highly conserved Pro-Gly doublet in non-animal small heat shock proteins and characterization of its structural and functional roles in Mycobacterium tuberculosis Hsp16.3. Biochemistry-Moscow, 71: S83-S90.

46.

Gong HQ, Peng YB, Zou C, Wang DH, Xu ZH, Bai SN (2006) A simple treatment to significantly increase signal specificity in immunohistochemistry. Plant Molecular Biology Reporter, 24: 93-101.

47.

Liu C, Li D, Hederstedt L, Li LF, Liang YH, Su XD (2006) Preparation, crystallization and preliminary X-ray analysis of protein YtlP from Bacillus subtilis. Acta Crystallographica Section F-Structural Biology and Crystallization Communications, 62: 967-969.

48.

Fu TM, Zhang XY, Li LF, Liang YH, Su XD (2006) Preparation, crystallization and preliminary X-ray analysis of the methionine synthase (MetE) from Streptococcus mutans. Acta Cryst, 62: 984-985.

49.

Wang J, Zhou YF, Li LF, Liang YH, Su XD (2006) Purification, crystallization and preliminary X-ray analysis of the glucosamine-6-phosphate N-acetyltransferase from human liver. Acta Crystallographica Section F-Structural Biology and Crystallization Communications, 62: 1097-1099.

50.

Su XD, Liang YH, Li LF, Nan J, Erik Brostromer, Liu P, Dong YH, Xian DC (2006) A large-scale, high-efficiency and low-cost platformfor structural genomics studies. Acta Cryst. Sect, D 62: 843-851.

51.

Dai XY, Gu XC, Luo M, Zheng XF (2006) Protein expression, crystallization and preliminary X-ray crystallographic studies on HSCARG from Homo sapiens. Protein and Peptide Letters, 13: 955-957.

52.

Chen YC, Yang EC, Liu ZF, Tian ZX, Wang YP (2006) The role of CopG mediated DNA bending on the regulation of the sigma(54)-dependent promoters in E-coli. Chinese Science Bulletin, 51: 8 934-940.

53.

Tian ZX, Zou HS, Li J, Zhang YT, Liu Y, Yu GQ, Zhu JB, Ruberg S, Becker A, Wang YP (2006) Transcriptome analysis of Sinorhizobium meliloti nodule bacteria in nifA mutant background. Chinese Science Bulletin, 51: 2079-2086.

54.

Tian ZX , Mao XJ, Su W, Li J, Becker A, Wang YP (2006) Exogenous cAMP upregulates the expression of glnII and glnK-amtB genes in Sinorhizobium meliloti 1021. Chinese Science Bulletin, 51: 1982-1985.

55.

Chen J, Mao SJ, Xie Y, Cao ZR, Zhang Y, Liu J, Chen ZL, Qu LJ, Gu HY (2006) Expression and inhibitory activity analysis of a 25-kD Bowman-Birk protease inhibitor in rice. Chinese Science Bulletin, 51: 54-62.

56.

Wang BC, Pan YH, Meng DZ, Zhu YX (2006) Identification and quantitative analysis of significantly accumulated proteins during the Arabidopsis seedling de-etiolation process. Journal of Integrative Plant Biology, 48:104-113.

57.

Chen YH, Zhang XB, Wu Wei, Chen ZL, Gong HY, Qu LJ (2006) overexpression of the Wounding-Responsive Gene AtMYB15 Activates the Shikimate Pathway in Arabidopsis. Journal of Integrative Plant Biology, 48: 1084-1095.

58.

Li Q, Feng JX, Han P, Zhu YX (2006) Parental RNA is significantly degraded during Arabidopsis seed germination. J. Integrative Plant Biology, 48: 114-120.

59.

Olmedo G, Guo H, Gregory B, Nourizadeh S, Aguilar-Henonin L, Li H, An F, Guzman P, Ecker JR (2006) ETHYLENE-INSENSITIVE5 encodes a 5'→3' exoribonuclease required for regulation of the EIN3-targeting F-box proteins EBF1/2. PNAS, 103: 13286-13293.

60.

Xu DY, Yu X, Guo C, Zhao JD (2006) Construction of a non-antibiotic expression system in a marine cyanobacterium Synechococcus sp PCC 7002 and its application in production of oral vaccine against enterotoxin of Escherichia coli. Journal of Applied Phycology, 18: 127-134.

61.

Yang J, Gu HY (2006) Duplication and divergent evolution of the CHS and CHS-like genes in the chalcone synthase (CHS) superfamily Chinese Science Bulletin, 51:505-509.

62.

Xu, ZH（2006）Recent progress in Arabidopsis research in China: A preface. Journal of Integrative Plant Biology, 48:1-4.