2017Publications
No. |
Paper Information |
1. |
Liu SF, Xu ZY, Leng H, Zheng P, Yang JY, Chen KF, Feng JX, Li Q. (2017) RPA binds histone H3-H4 and functions in DNA replication-coupled nucleosome assembly. Science, 355: 415-420. |
2. |
Ge ZX, Bergonci T, Zhao YL, Zou YJ, Du S, Liu MC, Luo XJ, Ruan H, García-Valencia LE, Zhong S, Hou SY, Huang QP, Lai LH, Moura DS, Gu HY, Dong J, Wu HM, Dresselhaus T, Xiao JY, Cheung AY, Qu LJ. (2017) Arabidopsis pollen tube integrity and sperm release are regulated by RALF-mediated signaling. Science, 358: 1596-1600. |
3. |
Li XY, Xiong XS, Yi CQ. (2017) Epitranscriptome sequencing technologies: decoding RNA modifications. Nat Methods., 14: 23-31. |
4. |
Zhu CX, Gao Y, Guo HS, Xia B, Song JH, Wu XL, Zeng H, Kee K, Tang FC, Yi CQ. (2017) Single-Cell 5-Formylcytosine Landscapes of Mammalian Early Embryos and ESCs at Single-Base Resolution. Cell Stem Cell., 20: 720-731. |
5. |
Wang YT, Ning XH, Gao PF, Wu SX, Sha MY, Lv MZ, Zhou X, Gao JY, Fang R, Meng GX, Su XD, Jiang ZF. (2017) Inflammasome Activation Triggers Caspase-1-Mediated Cleavage of cGAS to Regulate Responses to DNA Virus Infection. Immunity, 46: 393-404. |
6. |
Zhou YX, Wang P, Tian F, Gao G, Huang L, Wei WS, Xie XS. (2017) Painting a specific chromosome with CRISPR/Cas9 for live-cell imaging. Cell Res., 27: 298-301. |
7. |
Li X, Xiong X, Zhang M, Wang K, Chen Y, Zhou J, Mao Y, Lv J,D, Chen XW, Wang C, Qian SB, Yi CQ. (2017) Base-Resolution Mapping Reveals Distinct m1A Methylome in Nuclear- and Mitochondrial-Encoded Transcripts. Mol Cell., 68: 993-1005. |
8. |
Ji YP, Yang CZ, Tang ZF, Yang YF, Tian YL, Yao HW, Zhu X, Zhang ZM, Ji JF, Zheng XF. (2017) Adenylate kinase hCINAP determines self-renewal of colorectal cancer stem cells by facilitating LDHA phosphorylation. Nat Commun., 8: 15308. |
9. |
Zhang Y, Liu LL, Guo SJ, Song JH, Zhu CX, Yue ZW, Wei WS, Yi CQ. (2017) Deciphering TAL effectors for 5-methylcytosine and 5-hydroxymethylcytosine recognition. Nat Commun., 8: 901. |
10. |
Sun XZ, Li YX, He WR, Ji CG, Xia PX, Wang YC, Du S, Li HJ, Raikhel N, Xiao JY, Guo HW. (2017) Pyrazinamide and derivatives block ethylene biosynthesis by inhibiting ACC oxidase. Nat Commun., 8: 15758. |
11. |
Lei ZX, Yi CQ. (2017) A Radiolabeling-Free, qPCR-Based Method for Locus-Specific Pseudouridine Detection. Angew Chem Int Ed Engl., 56: 14878-14882. |
12. |
Wu JG, Yang RX, Yang ZR, Yao SZ, Zhao SS, Wang Y, Li PC, Song XW, Jin L, Zhou T, Lan Y, Xie LH, Zhou XP, Chu CC, Qi YJ, Cao XF, Li Y. (2017) ROS accumulation and antiviral defence control by microRNA528 in rice. Nat plants., 3: 16203. |
13. |
Zhang J, Huang QP, Zhong S, Bleckmann A, Huang JY, Guo XY, Lin Q, Gu HY, Dong J, Dresselhaus T, Qu LJ. (2017) Sperm cells are passive cargo of the pollen tube in plant fertilization. Nat plants., 3: 17079. |
14. |
Cheng SJ, Shi FY, Liu H, Ding Y, Jiang S, Liang N, Gao G. (2017) Accurately annotate compound effects of genetic variants using a context-sensitive framework. Nucleic Acids Res., 45: e82. |
15. |
Kang YJ, Yang DC, Kong L, Hou M, Meng YQ, Wei LP, Gao G. (2017) CPC2: a fast and accurate coding potential calculator based on sequence intrinsic features. Nucleic Acids Res., 45: W12-W16. |
16. |
Huang AY, Zhang Z, Ye AY, Dou YM, Yan LL, Yang XX, Zhang YH, Wei LP. (2017) MosaicHunter: accurate detection of postzygotic single-nucleotide mosaicism through next-generation sequencing of unpaired, trio, and paired samples. Nucleic Acids Res., 45: e76. |
17. |
Jin JP, Tian F, Yang DC, Meng YQ, Kong L, Luo JC, Gao G. (2017) PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants. Nucleic Acids Res., 45: D1040-D1045. |
18. |
Ahmad M, Shen WP, Li W, Xue YT, Zou SG, Xu DY, Wang WD. (2017) Topoisomerase 3 beta is the major topoisomerase for mRNAs and linked to neurodevelopment and mental dysfunction. Nucleic Acids Res., 45: 2704-2713. |
19. |
Zheng ZG, Amin ON, Li XY, Dong CX, Lin Y, Haselkorn R, Zhao JD. (2017) An amidase is required for proper intercellular communication in the filamentous cyanobacterium Anabaena sp PCC 7120. Proc Natl Acad Sci U S A., 114: E1405-E1412. |
20. |
Yang M, Wang XC, Ren DQ, Huang H, Xu MQ, He GM, Deng XW. (2017) Genomic architecture of biomass heterosis in Arabidopsis. Proc Natl Acad Sci U S A., 114: 8101-8106. |
21. |
Yang JG, Xie XQ, Yang MX, Dixon R, Wang YP. (2017) Modular electron-transport chains from eukaryotic organelles function to support nitrogenase activity. Proc Natl Acad Sci U S A., 114: E2460-E2465. |
22. |
Ling JJ, Li J, Zhu DM, Deng XW. (2017) Noncanonical role of Arabidopsis COP1/SPA complex in repressing BIN2-mediated PIF3 phosphorylation and degradation in darkness. Proc Natl Acad Sci U S A., 114: 3539-3544. |
23. |
Lin F, Xu DQ, Jiang Y, Chen HD, Fan LM, Holm M, Deng XW. (2017) Phosphorylation and negative regulation of CONSTITUTIVELY PHOTOMORPHOGENIC 1 by PINOID in Arabidopsis. Proc Natl Acad Sci U S A., 114: 6617-6622. |
24. |
Wang Z, Li J, Chen SX, Heng YF, Chen Z, Yang J, Zhou KJ, Pei JW, He H, Deng XW, Ma LG. (2017) Poaceae-specific MS1 encodes a phospholipid-binding protein for male fertility in bread wheat. Proc Natl Acad Sci U S A., 114: 12614–12619. |
25. |
Dong J, Ni WM, Yu RB, Deng XW, Chen HD, Wei N. (2017) Light-dependent degradation of PIF3 by SCFEBF1/2 promotes a photomorphogenic response in Arabidopsis. Curr Biol., 27: 2420-2430. |
26. |
Zhang JZ, Wei BY, Yuan RR, Wang JH, Ding MX, Chen ZY, Yu H, Qin GJ. (2017) The Arabidopsis RING-Type E3 Ligase TEAR1 Controls Leaf Development by Targeting the TIE1 Transcriptional Repressor for Degradation. Plant cell, 29: 243-259. |
27. |
Liu XQ, Liu RL, Li Y, Shen X, Zhong SW, Shi H. (2017) EIN3 and PIF3 form an interdependent module that represses chloroplast development in buried seedlings. Plant Cell, 29: 3051-3067. |
28. |
Lian TF, Xu YP, Li LF, Su XD. (2017) Crystal Structure of Tetrameric Arabidopsis MYC2 Reveals the Mechanism of Enhanced Interaction with DNA. Cell Rep., 19: 1334-1342. |
29. |
Xu YX, Ning SK, Wei Z, Xu R, Xu XL, Xing MT, Guo R, Xu DY. (2017) 53BP1 and BRCA1 control pathway choice for stalled replication restart. Elife., 6: e30523. |
30. |
Zhao SS, Hong W, Wu JG, Wang Y, Ji SY, Zhu SY, Wei CH, Zhang JS, Li Y. (2017) A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection. Elife., 6: e27529. |
31. |
Cui JX, Zhu QY, Zhang H, Cianfrocco MA, Leschziner AE, Dixon JE, Xiao JY. (2017) Structure of Fam20A reveals a pseudokinase featuring a unique disulfide pattern and inverted ATP-binding. Elife., 6: e23990. |
32. |
Zheng LJ, Zhang C, Shi CN, Yang ZR, Wang Y, Zhou T, Sun F, Wang H, Zhao SSS, Qin QQQ, Qiao R, Ding ZMM, Wei CHH, Xie LHH, Wu JG, Li Y. (2017) Rice stripe virus NS3 protein regulates primary miRNA processing through association with the miRNA biogenesis factor OsDRB1 and facilitates virus infection in rice. PloS Pathog., 13: e1006662. |
33. |
Fang R, Jiang Q, Zhou X, Wang C, Guan Y, Tao J, Xi J, Feng J, Jiang ZF. (2017) MAVS activates TBK1 and IKKε through TRAFs in NEMO dependent and independent manner. PloS Pathog., 13: e1006720. |
34. |
Zhao F, Zheng YF, Zeng T, Sun R, Yang JY, Li Y, Ren DT, Ma H, Xu ZH, Bai SN. (2017) Phosphorylation of SPOROCYTELESS/NOZZLE by the MPK3/6 Kinase Is Required for Anther Development. Plant Physiol., 173: 2265-2277. |
35. |
He S, Sun Y, Yang Q, Zhang XY, Huang QP, Zhao P, Sun MX, Liu JJ, Qian WQ, Qin GJ, Gu HY, Qu LJ. (2017) A Novel Imprinted Gene NUWA Controls Mitochondrial Function in Early Seed Development in Arabidopsis. PloS Genet., 13: e1006553. |
36. |
Duan Y, Dou S, Luo S, Zhang H, Lu J. (2017) Adaptation of A-to-I RNA editing in Drosophila. . PloS Genet., 13: e1006648. |
37. |
Zhou X, Jiang ZF. (2017) N4 DNA recognition by STAT6: structural and functional implications. Protein Cell., 8: 240-241. |
38. |
Bai DM, Zheng XF. (2017) PML-RARA mutations confer varying arsenic trioxide resistance. Protein Cell., 8: 296-301. |
39. |
Song JH, Yi CQ. (2017) Chemical Modifications to RNA: A New Layer of Gene Expression Regulation. ACS Chem Biol., 12: 316-325. |
40. |
Fang R, Wang CG, Jiang QF, Lv MZ, Gao PF, Yu XY, Mu P, Zhang R, Bi S, Feng JM, Jiang ZF. (2017) NEMO-IKK beta Are Essential for IRF3 and NF-kappa B Activation in the cGAS-STING Pathway. J Immunol., 199: 3222-3233. |
41. |
Tao JL, Zhang XW, Jin JS, Du XX, Lian TF, Yang J, Zhou X, Jiang ZF, Su XD. (2017) Nonspecific DNA Binding of cGAS N Terminus Promotes cGAS Activation. J Immunol., 198: 3627-3636. |
42. |
An SN, Feng XP, Dai Y, Bo HL, Wang XQ, Li M, Woo JZ, Liang XM, Guo C, Liu CXC, Wei LP. (2017) Development and evaluation of a speech-generating AAC mobile app for minimally verbal children with autism spectrum disorder in Mainland China. Mol Autism., 8: 52. |
43. |
Dou YM, Yang XX, Li ZY, Wang S, Zhang Z, Ye AY, Yan LL, Yang CH, Wu QX, Li JR, Zhao BX, Huang AY, Wei LP. (2017) Postzygotic single-nucleotide mosaicisms contribute to the etiology of autism spectrum disorder and autistic traits and the origin of mutations. Hum Mutat., 38: 1002-1013. |
44. |
Liu XQ, Li Y, Zhong SW. (2017) Interplay between Light and Plant Hormones in the Control of Arabidopsis Seedling Chlorophyll Biosynthesis. Front Plant Sci., 8: 1433. |
45. |
Bai SN. (2017) Reconsideration of Plant Morphological Traits: From a Structure-Based Perspective to a Function-Based Evolutionary Perspective. Front Plant Sci., 8: 345. |
46. |
Zhen G, Qin P, Liu KY, Nie DY, Yang YZ, Deng XW, He H. (2017) Genome-wide dissection of heterosis for yield traits in two-line hybrid rice populations. Sci Rep., 7: 7635. |
47. |
Chen SX, Lin ZC, Zhou DG, Wang CR, Li H, Yu RB, Deng HC, Tang XY, Zhou SC, Deng XW, He H. (2017) Genome-wide study of an elite rice pedigree reveals a complex history of genetic architecture for breeding improvement. Sci Rep., 7: 45685. |
48. |
Yang XX, Liu AJ, Xu XJ, Yang XL, Zeng Q, Ye AY, Yu Z, Wang S, Huang AY, Wu XR, Wu QX, Wei LP, Zhang YH. (2017) Genomic mosaicism in paternal sperm and multiple parental tissues in a Dravet syndrome cohort. Sci Rep., 7: 15677. |
49. |
He RN, Peng JY, Yuan PF, Yang JJ, Wu XJ, Wang YN, Wei WS. (2017) Glucosyltransferase Activity of Clostridium difficile Toxin B Triggers Autophagy-mediated Cell Growth Arrest. Sci Rep., 7: 105320 |
50. |
Hu H, Zhang HM, Wang S, Ding M, An H, Hou YP, Yang XJ, Wei WS, Sun YJ, Tang C. (2017) Live visualization of genomic loci with BiFC-TALE. Sci Rep., 7: 40192. |
51. |
Liu BC, Hu JZ, Wang JN, Kong DC. (2017) Direct Visualization of RNA-DNA Primer Removal from Okazaki Fragments Provides Support for Flap Cleavage and Exonucleolytic Pathways in Eukaryotic Cells. J Biol Chem., 292: 4777-4788. |
52. |
Guan L, He P, Yang F, Zhang Y, Hu YF, Ding J, Hua Y, Zhang Y, Ye Q, Hu JZ, Wang T, Jin CW, Kong DC. (2017) Sap1 is a replication-initiation factor essential for the assembly of pre-replicative complex in the fission yeast Schizosaccharomyces pombe. J Biol Chem., 292: 6056-6075. |
53. |
Dong XD, Guan JH, Zheng CF, Zheng XF. (2017) The herpes simplex virus 1 UL36USP deubiquitinase suppresses DNA repair in host cells via deubiquitination of proliferating cell nuclear antigen. J Biol Chem., 292: 8472-8483. |
54. |
Zhao M, Liu D, Qu H. (2017) Systematic review of next-generation sequencing simulators: computational tools, features and perspectives. Brief Funct Genomics., 16: 121-128. |
55. |
Liu YN, Li Z, Lu JC, Zhao M, Qu H. (2017) CMGene: A literature-based database and knowledge resource for cancer metastasis genes. J Genet Genomics., 44: 277-279. |
56. |
Hao LH, Wei XL, Zhu JL, Shi J, Liu JJ, Gu HY, Tsuge T, Qu LJ. (2017) SNAIL1 is essential for female gametogenesis in Arabidopsis thaliana. J Integr Plant Biol., 59: 629-641. |
57. |
Shi YH, Huang JY, Sun TS, Wang XF, Zhu CQ, Ai YX, Gu HY. (2017) The precise regulation of different COR genes by individual CBF transcription factors in Arabidopsis thaliana. J Integr Plant Biol., 59: 118-133. |
58. |
Zhong S, Zhang J, Qu LJ. (2017) The signals to trigger the initiation of ovule enlargement are from the pollen tubes: The direct evidence. J Integr Plant Biol., 59: 600-603. |
59. |
Zhang Q, Li J, Zhao Y, Bao X, Wei LP, Wang J. (2017) Gene mutation analysis of 175 Chinese patients with early-onset epileptic encephalopathy. Clin Genet., 91: 717-724. |
60. |
Che X, Du XX, Cai XX, Zhang J, Xie WJ, Long ZR, Ye ZY, Zhang H, Yang LJ, Su XD, Gao YQ. (2017) Single Mutations Reshape the Structural Correlation Network of the DMXAA-Human STING Complex. J Phys Chem B., 121: 2073-2082. |
61. |
Zhou X, Jiang ZF. (2017) STING-mediated DNA sensing in cancer immunotherapy. Sci China Life Sci., 60: 563-574. |
62. |
Yan FX, Guan JH, Peng YY, Zheng XF. (2017) MyD88 NEDDylation negatively regulates MyD88-dependent NF-kappa B signaling through antagonizing its ubiquitination. Biochem Biophys Res Commun., 482: 632-637. |
63. |
Wang JP, Gao H, Bao XH, Zhang QP, Li JR, Wei LP, Wu XR, Chen Y, Yu SJ. (2017) SCN8A mutations in Chinese patients with early onset epileptic encephalopathy and benign infantile seizures. BMC Med Genet., 18: 104. |
64. |
Zhang J, Ma JF, Liu DS, Qin S, Sun S, Zhao JD, Sui SF. (2017) Structure of phycobilisome from the red alga Griffithsia pacifica. Nature, 551: 57-63. |
65. |
Chen Y, Wang L, Jin J, Luan Y, Chen C, Li Y, Chu H, Wang X, Liao G, Yu Y, Teng H, Wang Y, Pan W, Fang L, Liao L, Jiang ZF, Ge X, Li B, and Wang P. (2017) p38 inhibition provides anti-DNA virus immunity by regulation of USP21 phosphorylation and STING activation. J Exp Med., 214: 991-1010. |
66. |
Chen HH, Ning XH, Jiang ZF. (2017) Caspases control antiviral innate immunity. Cell Mol Immunol., 14: 736-747. |
67. |
Finci LI, Zhang J, Sun X, Smock RG, Meijers R, Zhang Y, Xiao JY, Wang JH. (2017). Structure of unliganded membrane-proximal domains FN4-FN5-FN6 of DCC. Protein Cell., 8: 701-705. |
68. |
Luo JY, Feng QR, Wei LP, Luo MM. (2017) Optogenetic activation of dorsal raphe neurons rescues the autistic-like social deficits in Shank3 knockout mice. Cell Res., 27: 950-953. |
69. |
Sun L, Jiang ZF, Acosta-Rodriguez VA, Berger M, Du X, Choi JH, Wang J, Wang KW, Kilaru GK, Mohawk JA, Quan J, Scott L, Hildebrand S, Li X, Tang M, Zhan X, Murray AR, La Vine D, Moresco EMY, Takahashi JS, Beutler B. (2017) HCFC2 is needed for IRF1- and IRF2-dependent Tlr3 transcription and for survival during viral infections. J Exp Med., 214: 3263-3277. |
70. |
Da LT, Chao E, Shuai Y, Wu SG, Su XD, Yu J (2017) T7 RNA polymerase translocation is facilitated by a helix opening on the fingers domain that may also prevent backtracking. Nucleic Acids Res., 45: 7909-9721. |
71. |
Fan HH, Qiao LH, Kang KD, Fan JF, Wei WS, Luo GX (2017) Attachment and Postattachment Receptors Important for Hepatitis C Virus Infection and Cell-to-Cell Transmission. J Virol., 91: e00280-17. |
72. |
Gou MY, Huang QS, Qian WQ, Zhang ZM, Jia ZH, Hua J. (2017) Sumoylation E3 ligase SIZ1 modulates plant immunity partly through the immune receptor gene SNC1 in Arabidopsis. Mol Plant Microbe Interact., 30: 334-342. |
73. |
Yan W, Chen ZF, Lu JW, Xu CJ, Xie G, Li YQ, Deng XW, He H, Tang XY. (2017) Simultaneous Identification of Multiple Causal Mutations in Rice. Front Plant Sci., 7: 2055. |
74. |
Fang YH, Li X, Bai SN, Rao GY. (2017) Sugar Treatments Can Induce AcLEAFY COTYLEDON1 Expression and Trigger the Accumulation of Storage Products during Prothallus Development of Adiantum capillus-veneris. Front Plant Sci., 8: 541. |
75. |
Qu LJ, Sun MX. (2017) Plant reproduction: Recent discoveries from China. J Integr Plant Biol., 59: 591-593. |
76. |
Li XY, Nai SS, Ding YH, Geng QZ, Zhu BT, Yu K, Zhu WG, Dong MQ, Su XD, Xu XZ, Li J (2017) Polo-like kinase 1 (PLK1)-dependent phosphorylation of methylenetetrahydrofolate reductase (MTHFR) regulates replication via histone methylation. Cell Cycle.,16: 1933-1942. |
77. |
李艳,钱伟强。(2017) 植物中DNA甲基化及去甲基化研究进展。生命科学, 29:302-309。 |
78. |
Xiong XS, Yi CQ, Peng JY. (2017) Epitranscriptomics: Toward A Better Understanding of RNA Modifications. Genomics Proteomics Bioinformatics., 15: 147-153. |
79. |
Luo JC. (2017) GSA and BIGD: Filling the Gap of Bioinformatics Resource and Service in China. Genomics Proteomics Bioinformatics., 15: 11-13. |
80. |
Luo SQ, Lu J. (2017) Silencing of Transposable Elements by piRNAs in Drosophila: An Evolutionary Perspective. Genomics Proteomics Bioinformatics., 15: 164-176. |
81. |
Jia DS, Mao QZ, Chen Y, Liu YY, Chen Q, Wu W, Zhang XF, Chen HY, Li Y, Wei TY. (2017) Insect symbiotic bacteria harbour viral pathogens for transovarial transmission. Nat Microbiol., 2: 17025. |
82. |
Dai XF, Zhu ML, Warren M, Balakrishnan R, Patsalo V, Okano H, Williamson JR, Fredrick K, Wang YP, Hwa T. (2017) Reduction of translating ribosomes enables Escherichia coli to maintain elongation rates during slow growth. Nat Microbiol., 2: 16231. |
83. |
Zhu M, Dai X, Guo W, Ge Z, Yang M, Wang H, Wang YP. (2017) Manipulating bacterial cell cycle and cell size by titrating the expression of ribonucleotide reductase. MBio., 8: e01741-17. |
84. |
Li MZ, Zhang Q, Shen J, Tang LF, Ji JG. (2017) Discovery and identification of serum potential biomarkers for Colorectal Cancer using TMT quantitative proteomics. Int J Cancer Oncol, 4: 1- 7. |
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